WormBase Tree Display for Variation: WBVar00089728

WBVar00089728 Evidence: Paper_evidence: WBPaper00000762
  Name: Public_name: n757
    Other_name: CE27833:p.Trp65Ter
      C37F5.1b.1:c.194G>A
      C37F5.1a.1:c.314G>A
      CE31440:p.Trp105Ter
    HGVSg: CHROMOSOME_IV:g.2278980C>T
  Sequence_details: SMap: S_parent: Sequence: C37F5
    Flanking_sequences: tgattgatgcagaagccgtggcgagaaagt gggacaacggaaggcgaaaccgcatatgaa
    Mapping_target: C37F5
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00002352
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00027283
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00305307
      WBGene00002990
    Transcript: C37F5.1a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C37F5.1a.1:c.314G>A
        HGVSp: CE31440:p.Trp105Ter
        cDNA_position: 314
        CDS_position: 314
        Protein_position: 105
        Exon_number: 3/7
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C37F5.1b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C37F5.1b.1:c.194G>A
        HGVSp: CE27833:p.Trp65Ter
        cDNA_position: 202
        CDS_position: 194
        Protein_position: 65
        Exon_number: 2/6
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C37F5.2
  Genetics: Interpolated_map_position: IV -8.47557
    Mapping_data: In_multi_point: 872
        873
  Description: Phenotype: WBPhenotype:0000700 Paper_evidence: WBPaper00000762
        Curator_confirmed: WBPerson2021
        Recessive: Paper_evidence: WBPaper00000762
          Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00000762
                Curator_confirmed: WBPerson2021
  Reference: WBPaper00000762
  Method: Substitution_allele