WormBase Tree Display for Variation: WBVar00089813
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WBVar00089813 | Evidence | Paper_evidence | WBPaper00003957 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n887 | |||||
Other_name | CE00895:p.Trp59Ter | ||||||
C07B5.5.1:c.176G>A | |||||||
HGVSg | CHROMOSOME_X:g.9540170G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | C07B5 | |||
Flanking_sequences | cagtgacaggattggcaggtggagttgcat | gtactacgtggatgtgaataaaaagggaac | |||||
Mapping_target | C07B5 | ||||||
Type_of_mutation | Substitution | g | a | ||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | MT | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00003828 | |||||
Transcript | C07B5.5.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | C07B5.5.1:c.176G>A | ||||||
HGVSp | CE00895:p.Trp59Ter | ||||||
cDNA_position | 217 | ||||||
CDS_position | 176 | ||||||
Protein_position | 59 | ||||||
Exon_number | 3/9 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
Genetics | Interpolated_map_position | X | 1.41614 | ||||
Description | Phenotype | WBPhenotype:0001172 | Person_evidence | WBPerson261 | |||
Curator_confirmed | WBPerson712 | ||||||
Remark | condensed chromatin persists after programmed cell death DNA in intestinal lumen not degraded, resembles e1392 | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00011145 | ||||||
Method | Substitution_allele |