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WormBase Tree Display for Variation: WBVar00089945

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Name Class

WBVar00089945NamePublic_namen1080
Sequence_detailsSeqStatusPending_curation
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00026952
WBStrain00027009
LaboratoryMT
StatusLive
AffectsGeneWBGene00001208
InteractorWBInteraction000501597
WBInteraction000501598
WBInteraction000501600
WBInteraction000501602
WBInteraction000501604
WBInteraction000504551
GeneticsMapping_dataIn_multi_point847
848
1065
1066
1387
DescriptionPhenotypeWBPhenotype:0000006Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
PenetranceHighPaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Range9999Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Phenotype_assayTemperature20Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
WBPhenotype:0000022Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0000154Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
RemarkMutants show a 37 percent drop in brood size (compared to wild-type)Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Phenotype_assayTemperature20Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
WBPhenotype:0000181Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
RemarkHSN axons are posteriorly misdirected and never reach the nerve ringPaper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
PenetranceLowPaper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
Range1111Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
EQ_annotationsAnatomy_termWBbt:0006830PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
Life_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
WBPhenotype:0000425Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
RemarkSerotonin levels are reduced in HSNs (determined immunocytochemically).Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
EQ_annotationsAnatomy_termWBbt:0006830PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
Life_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
WBPhenotype:0000470Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
RemarkHSNs fail to arrive at their final destination (between P5/6 and V4).Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
EQ_annotationsAnatomy_termWBbt:0006830PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
Life_stageWBls:0000038PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
WBPhenotype:0000542Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0000843Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Remarkmales mate poorly (mating efficiency is 45 percent)Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000056PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
WBPhenotype:0001005Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0001224Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
RemarkHSN axons fail to extend ventrally from their cell bodies to the ventral cord and instead extend laterally to reach the nerve ring, their normal destinationPaper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
PenetranceIncompletePaper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
Range2020Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
EQ_annotationsAnatomy_termWBbt:0006830PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
Life_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001105
Curator_confirmedWBPerson2021
WBPhenotype:0001309Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0001340Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
RemarkSee Table 1Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
PenetranceIncompletePaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Range7878Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Phenotype_assayTreatment0.75 mg/ml imipraminePaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Temperature24Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
WBPhenotype:0002285Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002288Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002293Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002296Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002299Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002302Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002309Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002314Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002319Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002322Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002325Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002337Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002346Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002348Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
Phenotype_not_observedWBPhenotype:0001068Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Phenotype_assayTreatment7.5 mg/ml serotoninPaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Temperature24Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
WBPhenotype:0001645Paper_evidenceWBPaper00040284
Curator_confirmedWBPerson2987
RemarkTable S2Paper_evidenceWBPaper00040284
Curator_confirmedWBPerson2987
ReferenceWBPaper00040284
WBPaper00043908
WBPaper00016216
WBPaper00001105
WBPaper00001133
WBPaper00014232
MethodAllele