WormBase Tree Display for Variation: WBVar00090227
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| WBVar00090227 | Evidence | Paper_evidence | WBPaper00003082 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | n1635 | |||||
| Other_name | CE26369:p.Pro983Ser | ||||||
| F56D1.4b.1:c.3058C>T | |||||||
| CE51835:p.Pro1007Ser | |||||||
| F56D1.4d.1:c.2947C>T | |||||||
| F56D1.4a.1:c.2953C>T | |||||||
| F56D1.4e.1:c.3019C>T | |||||||
| CE32052:p.Pro1020Ser | |||||||
| CE32051:p.Pro985Ser | |||||||
| HGVSg | CHROMOSOME_II:g.5471966C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F56D1 | |||
| Flanking_sequences | cactttaccaattggaatgactacaaagct | cggaatgttccactggattgcttcgattca | |||||
| Mapping_target | F56D1 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00003082 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | MT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00000548 | |||||
| Transcript | F56D1.4a.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| HGVSc | F56D1.4a.1:c.2953C>T | ||||||
| HGVSp | CE32051:p.Pro985Ser | ||||||
| cDNA_position | 3068 | ||||||
| CDS_position | 2953 | ||||||
| Protein_position | 985 | ||||||
| Exon_number | 16/20 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| F56D1.4e.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | F56D1.4e.1:c.3019C>T | ||||||
| HGVSp | CE51835:p.Pro1007Ser | ||||||
| cDNA_position | 3019 | ||||||
| CDS_position | 3019 | ||||||
| Protein_position | 1007 | ||||||
| Exon_number | 16/20 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| F56D1.4b.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | F56D1.4b.1:c.3058C>T | ||||||
| HGVSp | CE32052:p.Pro1020Ser | ||||||
| cDNA_position | 3154 | ||||||
| CDS_position | 3058 | ||||||
| Protein_position | 1020 | ||||||
| Exon_number | 17/21 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| F56D1.4d.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | F56D1.4d.1:c.2947C>T | ||||||
| HGVSp | CE26369:p.Pro983Ser | ||||||
| cDNA_position | 3063 | ||||||
| CDS_position | 2947 | ||||||
| Protein_position | 983 | ||||||
| Exon_number | 16/20 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| Genetics | Interpolated_map_position | II | -1.29917 | ||||
| Reference | WBPaper00003082 | ||||||
| Method | Substitution_allele |
