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WormBase Tree Display for Variation: WBVar00090789

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Name Class

WBVar00090789EvidencePaper_evidenceWBPaper00031335
NamePublic_namen4099
Other_nameCE29914:p.Ser2239IlefsTer18
Y71G12B.11d.1:c.3589_4285del
Y71G12B.11b.1:c.*4020_*4716del
Y71G12B.11e.1:c.5620_6316del
Y71G12B.11a.1:c.6715_7411del
CE50474:p.Ser1874IlefsTer18
CE46470:p.Ser1576IlefsTer18
Y71G12B.11c.1:c.4726_5422del
CE49571:p.Ser1197IlefsTer18
HGVSgCHROMOSOME_I:g.1738180_1739175del
Sequence_detailsSMapS_parentSequenceY71G12B
Flanking_sequencesGCCGTGAGGTCCCTGCTCGCCGTGGTGCGAACCATCATCGGAGATTGCAGGCTG
Mapping_targetY71G12B
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryMT
StatusLive
AffectsGeneWBGene00006771
WBGene00003278
WBGene00199017
TranscriptY71G12B.36VEP_consequencetranscript_ablation
VEP_impactHIGH
Exon_number1/1
Y71G12B.11c.1 (11)
Y71G12B.29
Y71G12B.11e.1 (11)
Y71G12B.11a.1 (11)
Y71G12B.11d.1 (11)
Y71G12B.11b.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,3_prime_UTR_variant,intron_variant
VEP_impactHIGH
HGVScY71G12B.11b.1:c.*4020_*4716del
cDNA_position7018-7714
Intron_number11/12
Exon_number11-12/13
IsolationMutagenUV-TMPPaper_evidenceWBPaper00031335
GeneticsInterpolated_map_positionI-13.1255
DescriptionPhenotypeWBPhenotype:0000062Paper_evidenceWBPaper00031335
Curator_confirmedWBPerson2021
Variation_effectProbable_null_via_phenotypePaper_evidenceWBPaper00031335
Curator_confirmedWBPerson2021
ReferenceWBPaper00031335
MethodDeletion_allele