WormBase Tree Display for Variation: WBVar00090794
expand all nodes | collapse all nodes | view schema
| WBVar00090794 | Evidence | Paper_evidence | WBPaper00031335 | ||
|---|---|---|---|---|---|
| Name | Public_name | n4105 | |||
| Other_name | F16A11.3a.1:c.711+2170_711+2526del | ||||
| F16A11.3d.1:c.927+2170_927+2526del | |||||
| F16A11.3c.1:c.711+2170_711+2526del | |||||
| F16A11.3b.1:c.711+2170_711+2526del | |||||
| HGVSg | CHROMOSOME_I:g.9379946_9380302del | ||||
| Sequence_details | SMap | S_parent | Sequence | F16A11 | |
| Flanking_sequences | TCCAGGTCACGATCCCGA | TTCGACCCCACCACCCTT | |||
| Mapping_target | F16A11 | ||||
| Type_of_mutation | Deletion | ||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Laboratory | MT | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00197324 | |||
| WBGene00003299 | |||||
| WBGene00305537 | |||||
| WBGene00008878 | |||||
| Transcript | F16A11.3c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F16A11.3c.1:c.711+2170_711+2526del | ||||
| Intron_number | 5/15 | ||||
| F16A11.4 | |||||
| F16A11.6 | VEP_consequence | transcript_ablation | |||
| VEP_impact | HIGH | ||||
| cDNA_position | 1-? | ||||
| Exon_number | 1/1 | ||||
| F16A11.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F16A11.3a.1:c.711+2170_711+2526del | ||||
| Intron_number | 6/25 | ||||
| F16A11.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F16A11.3b.1:c.711+2170_711+2526del | ||||
| Intron_number | 6/24 | ||||
| M04C9.10 | |||||
| F16A11.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F16A11.3d.1:c.927+2170_927+2526del | ||||
| Intron_number | 7/25 | ||||
| Isolation | Mutagen | UV-TMP | Paper_evidence | WBPaper00031335 | |
| Genetics | Interpolated_map_position | I | 3.75896 | ||
| Reference | WBPaper00031335 | ||||
| Method | Deletion_allele |
