WormBase Tree Display for Variation: WBVar00091352

WBVar00091352 Name: Public_name: WBVar00091352
    Other_name: nP118
      haw70164
      cewivar00222145
      CE20547:p.Leu158=
      F53E2.2.1:c.472T>C
      C38C3.5.1:c.4-836T>C
    HGVSg: CHROMOSOME_V:g.1476046T>C
  Sequence_details: SMap: S_parent: Sequence: C38C3
    Flanking_sequences: gagccacaaggaactcctcaacaag tgggcgagaaatacggagatcacta
    Mapping_target: C38C3
    Type_of_mutation: Substitution: T C
    PCR_product: snp_nP117.amp
    SeqStatus: Sequenced
  Variation_type: SNP
    Confirmed_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: Million_mutation_project_reanalysis
      WGS_Hawaiian_Waterston
    History: Acquires_merge: WBVar00202888
    Status: Live
  Affects: Gene: WBGene00302980
      WBGene00006794
    Transcript: F53E2.2.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F53E2.2.1:c.472T>C
        HGVSp: CE20547:p.Leu158=
        cDNA_position: 525
        CDS_position: 472
        Protein_position: 158
        Exon_number: 6/7
        Codon_change: Ttg/Ctg
        Amino_acid_change: L
      C38C3.5.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C38C3.5.1:c.4-836T>C
        Intron_number: 2/6
  Remark: [RFLP] PCR and sequencing
  Method: SNP