WormBase Tree Display for Variation: WBVar00091556
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WBVar00091556 | Evidence | Paper_evidence | WBPaper00004900 | ||
---|---|---|---|---|---|
Name | Public_name | ok255 | |||
Other_name | F40E10.4.1:c.48_1019+8del | ||||
HGVSg | CHROMOSOME_X:g.14674422_14676681del | ||||
Sequence_details | SMap | S_parent | Sequence | C26G2 | |
Flanking_sequences | atttattctacttatacctgaaagtgccac | attggtgtcacttttgttcgaactcatcaa | |||
Mapping_target | C26G2 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok255_external | ||||
ok255_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00005272 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004854 | |||
Transcript | F40E10.4.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F40E10.4.1:c.48_1019+8del | ||||
cDNA_position | 95-? | ||||
CDS_position | 48-? | ||||
Protein_position | 16-? | ||||
Intron_number | 2-11/33 | ||||
Exon_number | 2-11/34 | ||||
Interactor | WBInteraction000524191 | ||||
WBInteraction000537329 | |||||
WBInteraction000537350 | |||||
WBInteraction000537352 | |||||
Description (2) | |||||
Reference | WBPaper00040335 | ||||
WBPaper00032446 | |||||
WBPaper00032907 | |||||
WBPaper00045955 | |||||
WBPaper00050480 | |||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |