WormBase Tree Display for Variation: WBVar00091771

WBVar00091771 Name: Public_name: ok483
    Other_name: T21G5.5b.1:c.303+47_983+269del
      T21G5.5c.1:c.429+47_1109+269del
      T21G5.5d.2:c.519+47_1199+269del
      T21G5.5d.1:c.519+47_1199+269del
      T21G5.5b.2:c.303+47_983+269del
    HGVSg: CHROMOSOME_I:g.6879505_6881200del
  Sequence_details: SMap: S_parent: Sequence: T21G5
    Flanking_sequences: ccttactccaccttcaagtgtttaggagat ttgttttgttattaaaaaaaagttttagaa
    Mapping_target: T21G5
    Type_of_mutation: Deletion
    PCR_product: OK483_external
      OK483_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035620
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006423
    Transcript: T21G5.5d.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T21G5.5d.2:c.519+47_1199+269del
        Intron_number: 4-6/8
        Exon_number: 5-6/9
      T21G5.5b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T21G5.5b.1:c.303+47_983+269del
        Intron_number: 5-7/8
        Exon_number: 6-7/9
      T21G5.5c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T21G5.5c.1:c.429+47_1109+269del
        Intron_number: 3-5/6
        Exon_number: 4-5/7
      T21G5.5b.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T21G5.5b.2:c.303+47_983+269del
        Intron_number: 3-5/6
        Exon_number: 4-5/7
      T21G5.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 3-4/4
        Exon_number: 4-5/5
      T21G5.5d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T21G5.5d.1:c.519+47_1199+269del
        Intron_number: 5-7/9
        Exon_number: 6-7/10
  Isolation: Mutagen: UV/TMP
  Remark: Last updated on 29 Nov 2002
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele