WormBase Tree Display for Variation: WBVar00091814

WBVar00091814 Evidence: Paper_evidence: WBPaper00032196
  Name: Public_name: ok527
    Other_name: F35G8.1.1:c.482_686+112del
    HGVSg: CHROMOSOME_X:g.9316974_9318184del
  Sequence_details: SMap: S_parent: Sequence: F35G8
    Flanking_sequences: aagtacagattttcactacccctattatta ccatccgaatcattggcgacaaaactgcaa
    Mapping_target: F35G8
    Type_of_mutation: Deletion
    PCR_product: OK527_external
      OK527_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031475
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00018067
    Transcript: F35G8.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F35G8.1.1:c.482_686+112del
        cDNA_position: 482-?
        CDS_position: 482-?
        Protein_position: 161-?
        Intron_number: 4-5/9
        Exon_number: 4-5/10
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0002284 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002303 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002328 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002341 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002344 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0004025 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
    Phenotype_not_observed: WBPhenotype:0001012 Paper_evidence: WBPaper00032196
        Curator_confirmed: WBPerson712
        Remark: Animals were as susceptible to infection by P. aeruginosa as N2 animals. Paper_evidence: WBPaper00032196
            Curator_confirmed: WBPerson712
        Phenotype_assay: Strain: WBStrain00031475 Paper_evidence: WBPaper00032196
              Curator_confirmed: WBPerson712
  Reference: WBPaper00043908
    WBPaper00032196
  Remark: Last updated on 29 Nov 2002
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele