WormBase Tree Display for Variation: WBVar00092185

WBVar00092185 Name: Public_name: ok913
    Other_name: C52E12.2b.1:c.599+82_599+1366del
      C52E12.2a.2:c.599+82_599+1366del
      C52E12.2a.1:c.599+82_599+1366del
    HGVSg: CHROMOSOME_II:g.6997235_6998519del
  Sequence_details: SMap: S_parent: Sequence: C52E12
    Flanking_sequences: ggcaaactaaaccaagtttaatgaccgggg gttagtttccacaagtctgaacattcatat
    Mapping_target: C52E12
    Type_of_mutation: Deletion
    PCR_product: ok913_external
      ok913_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031702
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00304189
      WBGene00006831
    Transcript: C52E12.2a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2a.2:c.599+82_599+1366del
        Intron_number: 5/23
      C52E12.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2b.1:c.599+82_599+1366del
        Intron_number: 5/24
      C52E12.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2a.1:c.599+82_599+1366del
        Intron_number: 5/23
    Pseudogene: C52E12.11 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 1/1
        Exon_number: 1-2/2
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele