WormBase Tree Display for Variation: WBVar00092242

WBVar00092242 Name: Public_name: ok971
    HGVSg: CHROMOSOME_IV:g.17285727_17287515del
  Sequence_details: SMap: S_parent: Sequence: T28F3
    Flanking_sequences: tttacgtatgcactctgtgtctggttaatg aaagaaaacaaaaaattaaaaaagatgcaa
    Mapping_target: T28F3
    Type_of_mutation: Deletion
    PCR_product: ok971_external
      ok971_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036027
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00044067
    Transcript: T28F3.3.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2-7/7
        Exon_number: 1-8/8
      T28F3.3.3 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2-5/6
        Exon_number: 1-7/7
      T28F3.3.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-8/8
        Exon_number: 2-9/9
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5557
  Description: Phenotype: WBPhenotype:0000390 Paper_evidence: WBPaper00054685
        Curator_confirmed: WBPerson18084
      WBPhenotype:0000688 Paper_evidence: WBPaper00054685
        Curator_confirmed: WBPerson341
  Reference: WBPaper00054685
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele