WormBase Tree Display for Variation: WBVar00092431

WBVar00092431 Name: Public_name: ok1175
    Other_name: T23F2.1a.1:c.841_*173del
    HGVSg: CHROMOSOME_X:g.5494879_5495720del
  Sequence_details: SMap: S_parent: Sequence: T23F2
    Flanking_sequences: atcccttcgccgactgacaaggtgaagttt taaaatttataatttaccattttgaaaata
    Mapping_target: T23F2
    Type_of_mutation: Deletion
    PCR_product: ok1175_external
      ok1175_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004751
      WBStrain00036113
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00044623
    Transcript: T23F2.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 883-?
        CDS_position: 883-?
        Protein_position: 295-?
        Intron_number: 7-8/8
        Exon_number: 7-9/9
      T23F2.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T23F2.1a.1:c.841_*173del
        cDNA_position: 841-1487
        CDS_position: 841-?
        Protein_position: 281-?
        Intron_number: 6-7/8
        Exon_number: 6-9/9
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5224
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele