WormBase Tree Display for Variation: WBVar00092432

WBVar00092432 Name: Public_name: ok1176
    Other_name: T23F2.1a.1:c.99_996+6del
      T23F2.1b.1:c.141_1038+6del
    HGVSg: CHROMOSOME_X:g.5493858_5495040del
  Sequence_details: SMap: S_parent: Sequence: T23F2
    Flanking_sequences: cagacattttgtctcccaggggcatcgtgt agacataacacttttttaaaattcgtaatg
    Mapping_target: T23F2
    Type_of_mutation: Deletion
    PCR_product: ok1176_external
      ok1176_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004769
      WBStrain00036115
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00044623
    Transcript: T23F2.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T23F2.1b.1:c.141_1038+6del
        cDNA_position: 141-?
        CDS_position: 141-?
        Protein_position: 47-?
        Intron_number: 2-7/8
        Exon_number: 2-7/9
      T23F2.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T23F2.1a.1:c.99_996+6del
        cDNA_position: 99-?
        CDS_position: 99-?
        Protein_position: 33-?
        Intron_number: 1-6/8
        Exon_number: 1-6/9
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele