WormBase Tree Display for Variation: WBVar00092796

WBVar00092796 Name: Public_name: ok1587
    Other_name: C34G6.6a.1:c.577+55_2656del
      C34G6.6c.1:c.577+55_2656del
      C34G6.6b.1:c.577+55_2668del
    HGVSg: CHROMOSOME_I:g.5875617_5878071del
  Sequence_details: SMap: S_parent: Sequence: C34G6
    Flanking_sequences: tcacagccgatgacttgatttcaatagctc tgagagtatacaattttgaaatatattttc
    Mapping_target: C34G6
    Type_of_mutation: Deletion
    PCR_product: ok1587_external
      ok1587_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036349
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00016422
    Transcript: C34G6.6b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C34G6.6b.1:c.577+55_2668del
        cDNA_position: ?-2733
        CDS_position: ?-2668
        Protein_position: ?-890
        Intron_number: 3-6/9
        Exon_number: 4-7/10
      C34G6.6c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C34G6.6c.1:c.577+55_2656del
        cDNA_position: ?-2725
        CDS_position: ?-2656
        Protein_position: ?-886
        Intron_number: 3-6/9
        Exon_number: 4-7/10
      C34G6.6a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C34G6.6a.1:c.577+55_2656del
        cDNA_position: ?-2721
        CDS_position: ?-2656
        Protein_position: ?-886
        Intron_number: 3-6/9
        Exon_number: 4-7/10
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele