WormBase Tree Display for Variation: WBVar00092982
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| WBVar00092982 | Name | Public_name | ok1781 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_I:g.4170583_4171753del | ||||
| Sequence_details | SMap | S_parent | Sequence | R12E2 | |
| Flanking_sequences | tgtgctggtttgatcatgtgaaagaaggcg | aagaaagaaaaaatttcggaagtttccaga | |||
| Mapping_target | R12E2 | ||||
| Type_of_mutation | Deletion | ||||
| PCR_product | OK1781_external | ||||
| OK1781_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000056 | ||||
| WBStrain00036488 | |||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020035 | |||
| Transcript | R12E2.10.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| cDNA_position | ?-959 | ||||
| CDS_position | ?-957 | ||||
| Protein_position | ?-319 | ||||
| Intron_number | 2/6 | ||||
| Exon_number | 1-3/7 | ||||
| Isolation | Mutagen | EMS | |||
| Description | Phenotype (17) | ||||
| Reference | WBPaper00043908 | ||||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
