WormBase Tree Display for Variation: WBVar00093026
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WBVar00093026 | Name | Public_name | ok1828 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_X:g.10695006_10696095delinsTA | ||||
Sequence_details | SMap | S_parent | Sequence | F13E6 | |
Flanking_sequences | gatcatcaagcatttttttgatatcatgta | attgtgtaattttcagcatcttcttgttat | |||
Mapping_target | F13E6 | ||||
Type_of_mutation | Insertion | TA | |||
Deletion | |||||
PCR_product | ok1828_external | ||||
ok1828_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036553 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00008748 | |||
WBGene00008749 | |||||
Transcript | F13E6.5.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
Intron_number | 2-4/10 | ||||
Exon_number | 1-4/11 | ||||
F13E6.4.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
cDNA_position | 1960-? | ||||
Exon_number | 12/12 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |