WormBase Tree Display for Variation: WBVar00093247

WBVar00093247 Evidence: Paper_evidence: WBPaper00040574
  Name: Public_name: ok2060
    HGVSg: CHROMOSOME_I:g.9658185_9659406del
  Sequence_details: SMap: S_parent: Sequence: C03D6
    Flanking_sequences: agctggagttttcaaccactttttacggga ctgatgaggatccagtcgccgagccggttg
    Mapping_target: C03D6
    Type_of_mutation: Deletion
    PCR_product: ok2060_external
      ok2060_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032355
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00219796
      WBGene00007277
    Transcript: C03D6.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-463
        CDS_position: ?-463
        Protein_position: ?-155
        Intron_number: 1-2/5
        Exon_number: 1-3/6
      C03D6.9.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
    Interactor: WBInteraction000501351
  Isolation: Mutagen: EMS
  Description: Phenotype_not_observed: WBPhenotype:0000216 Paper_evidence: WBPaper00040574
        Curator_confirmed: WBPerson712
        Remark: MI and e3D were correctly specified. Paper_evidence: WBPaper00040574
            Curator_confirmed: WBPerson712
  Reference: WBPaper00040574
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele