WormBase Tree Display for Variation: WBVar00093292

WBVar00093292 Name: Public_name: ok2109
    HGVSg: CHROMOSOME_IV:g.7983676_7985652delinsTTTTTAAAA
  Sequence_details: SMap: S_parent: Sequence: F57H12
    Flanking_sequences: tggtacccatctctctctctctctccgtcc aatttatttttaaaaaattatattcggacc
    Mapping_target: F57H12
    Type_of_mutation: Insertion: TTTTTAAAA
      Deletion
    PCR_product: ok2109_external
      ok2109_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032389
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003178
      WBGene00000183
    Transcript: F57H12.1.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 764-?
        Exon_number: 7/7
      F57H12.7b.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 1-2/2
        Exon_number: 1-3/3
      F57H12.7a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-5/6
        Exon_number: 3-7/7
    Interactor: WBInteraction000521007
  Isolation: Mutagen: EMS
  Description (2)
  Disease_info: Models_disease: DOID:1289
    Models_disease_in_annotation: WBDOannot00000611
  Reference: WBPaper00037771
    WBPaper00044649
    WBPaper00045955
    WBPaper00065849
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele