WormBase Tree Display for Variation: WBVar00093489

WBVar00093489 Name: Public_name: ok2336
    Other_name: F54E4.4.1:c.290-24_1017del
    HGVSg: CHROMOSOME_X:g.14642265_14643481del
  Sequence_details: SMap: S_parent: Sequence: F54E4
    Flanking_sequences: actcactgtagtagtagttgtgggtaaagt ataaatgcgggaaaagcggacgatcttctg
    Mapping_target: F54E4
    Type_of_mutation: Deletion
    PCR_product: ok2336_external
      ok2336_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032493
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00010060
    Transcript: F54E4.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54E4.4.1:c.290-24_1017del
        cDNA_position: ?-1023
        CDS_position: ?-1017
        Protein_position: ?-339
        Intron_number: 4-8/12
        Exon_number: 5-9/13
  Isolation: Mutagen: EMS
  Description: Phenotype (17)
  Reference: WBPaper00043908
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele