WormBase Tree Display for Variation: WBVar00093496
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WBVar00093496 | Name | Public_name | ok2343 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_I:g.14034739_14035816del | ||||
Sequence_details | SMap | S_parent | Sequence | ZC334 | |
Flanking_sequences | ttttagaagacaattatcagttgaaaaatc | tttatcaacaaactccttccgcaagtcttc | |||
Mapping_target | ZC334 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok2343_external | ||||
ok2343_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032500 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00002113 | |||
Transcript | ZC334.2.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | 242-? | ||||
CDS_position | 225-? | ||||
Protein_position | 75-? | ||||
Intron_number | 2/3 | ||||
Exon_number | 2-4/4 | ||||
Interactor | WBInteraction000543187 | ||||
WBInteraction000543241 | |||||
Isolation | Mutagen | EMS | |||
Description | Phenotype | WBPhenotype:0002284 | Paper_evidence | WBPaper00043908 | |
Curator_confirmed | WBPerson2987 | ||||
WBPhenotype:0002288 | Paper_evidence | WBPaper00043908 | |||
Curator_confirmed | WBPerson2987 | ||||
WBPhenotype:0002301 | Paper_evidence | WBPaper00043908 | |||
Curator_confirmed | WBPerson2987 | ||||
WBPhenotype:0002325 | Paper_evidence | WBPaper00043908 | |||
Curator_confirmed | WBPerson2987 | ||||
WBPhenotype:0002335 | Paper_evidence | WBPaper00043908 | |||
Curator_confirmed | WBPerson2987 | ||||
WBPhenotype:0002341 | Paper_evidence | WBPaper00043908 | |||
Curator_confirmed | WBPerson2987 | ||||
WBPhenotype:0004022 | Paper_evidence | WBPaper00043908 | |||
Curator_confirmed | WBPerson2987 | ||||
WBPhenotype:0004023 | Paper_evidence | WBPaper00043908 | |||
Curator_confirmed | WBPerson2987 | ||||
Reference | WBPaper00043908 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |