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WormBase Tree Display for Variation: WBVar00102568

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Name Class

WBVar00102568EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00102568
Other_namepas7427
haw49659
cewivar00029762
ZK1010.2.1:c.905+79A>T
HGVSgCHROMOSOME_III:g.12976298T>A
Sequence_detailsSMapS_parentSequenceCHROMOSOME_III
Flanking_sequencesatatttaaaaaattcgatcatttttttttcgaaaaatgaagaaaatttaaaaatttaaagctaattttcagattaatcgatttttttctctaaatatcgcagtttttcgtaaaatcggattacaaaaatccgaaatttctgtgaatcatgttctggctctagatttttcgatttttacgtaaaaaaaaccaaaaaattctgatatgtatcgaaaaactcataaatttttcgattttttttcatgtttttagcaaaaaaacttctatcgaattcagtgtgcgccttttttggaatatatttaaaaaaaaaacaaaattttttaaaggcgcacactctttttaatttgaatttttttcgcgattttttcagattcctaaccctatccgtctgtctagtgagaaatggcgtcccgtcatcgtataatatttctccaattcaggtcgttcccaatagaaatccttattcaacagggtacaatcaagattaatcgagtgtcgaagagctgcgaattctccggatctcatgagagcctgcttccggctccacggaatctttcccagagttagcgattttgtagtgttggagagtggctccgcaaga
Mapping_targetCHROMOSOME_III
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000032From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_Hawaiian_Waterston
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006631From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00022902From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
RW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00182383
WBVar01273942
StatusLive
AffectsGeneWBGene00014176
TranscriptZK1010.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1010.2.1:c.905+79A>T
Intron_number2/3
ReferenceWBPaper00037807
MethodWGS_Pasadena_Quinlan