WormBase Tree Display for Variation: WBVar00104353
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| WBVar00104353 | Name | Public_name | WBVar00104353 | ||
|---|---|---|---|---|---|
| Other_name | pas9212 | ||||
| haw26060 | |||||
| cewivar00091053 | |||||
| F31E8.2b.1:c.215-375A>C | |||||
| F31E8.2a.1:c.215-375A>C | |||||
| HGVSg | CHROMOSOME_II:g.6812708A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F31E8 | |
| Flanking_sequences | tttctcattgtctttcggggatctaaaatcgtttttttttcttccaaaaaaactggatgctccatccgtttcacagcttcaggctgtgtcgattgtaatttgatatttggctaccacgacagcctttctctctttttccttctattcctccccatgcgctgaatattttagattttttacttttcgagtattgaaaagaagagaaagtagtaaccagaattgacgtgtatagaaagatggccccagaaaagaagagcatgtgccaaaaaagtggtagatgtccctagggagagacgaaaa | ttagtagaaaaagagagatagagaagtaaaagcatgaagaacaataacacattcatcactggacactaaaaaagtagttcgtttatgagttggcggctccaatgctccaatggacaacaaatactggtgacgaaaataattaggatagggaaaagagatattctttggggaataaatattatagagatatgcaaaaaataaataaatacatacatctattaataacttatagatttcaattaaatagtaaacaaaaacaaaaaaaaagtatagagaaaaaaaacagctgaaagtgaattt | |||
| Mapping_target | F31E8 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (36) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00172810 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004921 | |||
| Transcript | F31E8.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31E8.2b.1:c.215-375A>C | ||||
| Intron_number | 2/7 | ||||
| F31E8.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31E8.2a.1:c.215-375A>C | ||||
| Intron_number | 3/9 | ||||
| Method | WGS_Pasadena_Quinlan |
