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WormBase Tree Display for Variation: WBVar00109151

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Name Class

WBVar00109151EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00109151
Other_namecbs44672
HGVSgchrII:g.4861791A>G
Sequence_detailsSMapS_parentSequencecb25.fpc0072a
Flanking_sequencescgaaaaaaaaaacttttttttgaccaaaaattctgaaaattttcagaatcaatttttagacttcaaacttttcaggggaagtttttaacaataaattcaa
Mapping_targetcb25.fpc0072a
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (13)
Polymorphic_strain_digest (13)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00026966
TranscriptCBG04253a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG04253a.1:c.258+70T>C
Intron_number3/22
CBG04253b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG04253b.1:c.258+70T>C
Intron_number3/22
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP