WormBase Tree Display for Variation: WBVar00109157

WBVar00109157 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00109157
    Other_name: cbs44678
    HGVSg: chrII:g.5049105C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0072a
    Flanking_sequences: gaaggtgatgagaacagtttcctttggaatgtagatacggagacgggatc tccggacaagaattcgacgactccttcggctctgaaacaccgtttatcag
    Mapping_target: cb25.fpc0072a
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (16)
      Polymorphic_strain_digest (16)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00027000
    Transcript: CBG04292.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG04292.1:c.1603G>A
        HGVSp: CBP01117.1:p.Gly535Arg
        cDNA_position: 1630
        CDS_position: 1603
        Protein_position: 535
        Exon_number: 4/6
        Codon_change: Gga/Aga
        Amino_acid_change: G/R
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP