WormBase Tree Display for Variation: WBVar00114900

WBVar00114900 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00114900
    Other_name: cbs50421
    HGVSg: chrIV:g.6476677G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2220b
    Flanking_sequences: cactctacatggctgcacaggaaaatcatgaagacgttgttcgatatctt tgaatcacggagccaatcaagcactctcaactgaagacggattcacacca
    Mapping_target: cb25.fpc2220b
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TCNGA Hpy188I 358 236 143 140 83 40
      Polymorphic_strain_digest: TCNGA Hpy188I 594 143 140 83 40
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031034
    Transcript: CBG09456.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG09456.1:c.457C>T
        HGVSp: CBP08227.1:p.Leu153%3D
        cDNA_position: 584
        CDS_position: 457
        Protein_position: 153
        Exon_number: 4/16
        Codon_change: Ctg/Ttg
        Amino_acid_change: L
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP