WormBase Tree Display for Variation: WBVar00116379
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WBVar00116379 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
WBPaper00055507 | |||||
Name | Public_name | WBVar00116379 | |||
Other_name | cbs51900 | ||||
cb51900 | Paper_evidence | WBPaper00055507 | |||
HGVSg | chrX:g.12755625C>A | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2397 | |
Flanking_sequences | tccccagcactttccatcttctctc | cccaattcgtaccttattcttgctc | |||
Mapping_target | cb25.fpc2397 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type (4) | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00032220 | |||
Transcript | CBG11009a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG11009a.1:c.324+13G>T | ||||
Intron_number | 4/26 | ||||
CBG11009b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG11009b.1:c.324+13G>T | ||||
Intron_number | 4/26 | ||||
Reference | WBPaper00030778 | ||||
WBPaper00055507 | |||||
Remark | Predicted by: ssaha-SNP v2.0 | ||||
This SNP was observed in 1 sequencing read(s) | |||||
Method | SNP |