WormBase Tree Display for Variation: WBVar00142908
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WBVar00142908 | Evidence | Paper_evidence | WBPaper00006395 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | e12 | ||||||
Other_name | CE35021:p.Gly149Glu | |||||||
T21D12.2b.1:c.446G>A | ||||||||
T21D12.2a.1:c.446G>A | ||||||||
CE49091:p.Gly149Glu | ||||||||
HGVSg | CHROMOSOME_IV:g.258714C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T21D12 | ||||
Flanking_sequences | aatgtccaactggagctccaggaccaccag | acttccaggtaaatttgaattgcatcagga | ||||||
Mapping_target | T21D12 | |||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00006395 | |||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004077 | |||||||
WBStrain00026744 | ||||||||
WBStrain00027172 | ||||||||
WBStrain00027245 | ||||||||
WBStrain00027276 | ||||||||
WBStrain00033525 | ||||||||
WBStrain00035533 | ||||||||
WBStrain00036391 | ||||||||
WBStrain00049370 | ||||||||
Laboratory | CB | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001071 | ||||||
Transcript | T21D12.2b.1 (12) | |||||||
T21D12.2a.1 (12) | ||||||||
Interactor | WBInteraction000503698 | |||||||
WBInteraction000537309 | ||||||||
Genetics | Interpolated_map_position | IV | -26.772 | |||||
Mapping_data | In_2_point (16) | |||||||
In_multi_point (25) | ||||||||
In_pos_neg_data | 2140 | |||||||
3687 | ||||||||
Description | Phenotype (16) | |||||||
Phenotype_not_observed | WBPhenotype:0000039 | Paper_evidence | WBPaper00032031 | |||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Life span of animals were not greater than that of wild type worms in the absence of infection. | Paper_evidence | WBPaper00032031 | |||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_assay | Genotype | Pnlp-29::GFP | Paper_evidence | WBPaper00032031 | ||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000505 | Paper_evidence | WBPaper00001328 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Males are not Ram. | Paper_evidence | WBPaper00001328 | |||||
Curator_confirmed | WBPerson712 | |||||||
EQ_annotations (2) | ||||||||
Phenotype_assay | Temperature | 20C | Paper_evidence | WBPaper00001328 | ||||
Curator_confirmed | WBPerson712 | |||||||
Genotype | him-5(e1490) | Paper_evidence | WBPaper00001328 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001426 | Paper_evidence | WBPaper00004883 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_assay | Genotype | arIs37 | Paper_evidence | WBPaper00004883 | ||||
Curator_confirmed | WBPerson712 | |||||||
Disease_info | Models_disease | DOID:37 | ||||||
Models_disease_in_annotation | WBDOannot00001177 | |||||||
Reference (14) | ||||||||
Method | Substitution_allele |