WormBase Tree Display for Variation: WBVar00142909
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| WBVar00142909 | Evidence | Paper_evidence | WBPaper00005927 | ||||
|---|---|---|---|---|---|---|---|
| WBPaper00006395 | |||||||
| Name | Public_name | e14 | |||||
| Other_name | CE30956:p.Trp5Ter | ||||||
| F16F9.2.1:c.15G>A | |||||||
| HGVSg | CHROMOSOME_X:g.8455626C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F16F9 | |||
| Flanking_sequences | agctgttttatttcagatgaggtatgcgtg | gtggtctcgtttgcatttttaatacttgga | |||||
| Mapping_target | F16F9 | ||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00006395 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain (19) | |||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001068 | |||||
| Transcript | F16F9.2.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F16F9.2.1:c.15G>A | ||||||
| HGVSp | CE30956:p.Trp5Ter | ||||||
| cDNA_position | 15 | ||||||
| CDS_position | 15 | ||||||
| Protein_position | 5 | ||||||
| Exon_number | 1/9 | ||||||
| Codon_change | tgG/tgA | ||||||
| Amino_acid_change | W/* | ||||||
| Genetics | Interpolated_map_position | X | 0.00141893 | ||||
| Mapping_data | In_2_point (27) | ||||||
| In_multi_point (67) | |||||||
| In_pos_neg_data (19) | |||||||
| Description | Phenotype | WBPhenotype:0000229 | Paper_evidence | WBPaper00005927 | |||
| Curator_confirmed | WBPerson48 | ||||||
| WBPhenotype:0000583 | Paper_evidence | WBPaper00005927 | |||||
| WBPaper00000031 | |||||||
| Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson48 | ||||||
| WBPerson712 | |||||||
| Remark | small dumpy, non-roller. ES3 ME0 | Person_evidence | WBPerson261 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Ease_of_scoring | ES3_Easy_to_score (2) | ||||||
| Phenotype_not_observed (3) | |||||||
| Reference (11) | |||||||
| Method | Substitution_allele |
