WormBase Tree Display for Variation: WBVar00142910
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WBVar00142910 | Evidence | Paper_evidence | WBPaper00002646 | |||
---|---|---|---|---|---|---|
Name | Public_name | e15 | ||||
Other_name | CE48967:p.Gly386Glu | |||||
CE26381:p.Gly387Glu | ||||||
R13A1.4a.1:c.1160G>A | ||||||
R13A1.4c.1:c.1163G>A | ||||||
R13A1.4b.1:c.1157G>A | ||||||
CE49123:p.Gly388Glu | ||||||
R13A1.4d.1:c.1040G>A | ||||||
CE04840:p.Gly347Glu | ||||||
HGVSg | CHROMOSOME_IV:g.7201523G>A | |||||
Sequence_details (5) | ||||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004079 | |||||
WBStrain00006289 | ||||||
WBStrain00006290 | ||||||
WBStrain00026625 | ||||||
WBStrain00026628 | ||||||
WBStrain00026629 | ||||||
WBStrain00026630 | ||||||
WBStrain00026631 | ||||||
WBStrain00026633 | ||||||
Laboratory | CB | |||||
Status | Live | |||||
Linked_to | WBVar00142911 | |||||
WBVar00142912 | ||||||
WBVar00142913 | ||||||
WBVar00142914 | ||||||
Affects | Gene | WBGene00006748 | ||||
Transcript | R13A1.4d.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.05 | deleterious | ||||
PolyPhen | 0.737 | possibly_damaging | ||||
HGVSc | R13A1.4d.1:c.1040G>A | |||||
HGVSp | CE04840:p.Gly347Glu | |||||
cDNA_position | 1040 | |||||
CDS_position | 1040 | |||||
Protein_position | 347 | |||||
Exon_number | 10/18 | |||||
Codon_change | gGa/gAa | |||||
Amino_acid_change | G/E | |||||
R13A1.4c.1 (12) | ||||||
R13A1.4a.1 (12) | ||||||
R13A1.4b.1 (12) | ||||||
Interactor | WBInteraction000517772 | |||||
WBInteraction000517956 | ||||||
Genetics | Interpolated_map_position | IV | 3.29358 | |||
Mapping_data | In_2_point | 105 | ||||
820 | ||||||
821 | ||||||
987 | ||||||
In_multi_point | 107 | |||||
108 | ||||||
770 | ||||||
3375 | ||||||
Description | Phenotype (21) | |||||
Reference | WBPaper00010943 | |||||
WBPaper00015305 | ||||||
WBPaper00015371 | ||||||
WBPaper00043908 | ||||||
WBPaper00022049 | ||||||
WBPaper00000031 | ||||||
WBPaper00002487 | ||||||
WBPaper00015036 | ||||||
WBPaper00024207 | ||||||
WBPaper00018951 | ||||||
Method | Substitution_allele |