WormBase Tree Display for Variation: WBVar00142958
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WBVar00142958 | Evidence | Paper_evidence | WBPaper00003843 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e96 | |||||
Other_name | Y37E11AR.6b.1:c.478C>T | ||||||
Y37E11AR.6a.1:c.793C>T | |||||||
CE27606:p.Arg265Ter | |||||||
CE48555:p.Arg160Ter | |||||||
HGVSg | CHROMOSOME_IV:g.3761479G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y37E11AR | |||
Flanking_sequences | gaatctctgtactcatcatctggacggctc | gatatgtgctcctactgccggctctcctgc | |||||
Mapping_target | Y37E11AR | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00003843 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004098 | ||||||
WBStrain00005671 | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006869 | |||||
Transcript | Y37E11AR.6a.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | Y37E11AR.6a.1:c.793C>T | ||||||
HGVSp | CE27606:p.Arg265Ter | ||||||
cDNA_position | 799 | ||||||
CDS_position | 793 | ||||||
Protein_position | 265 | ||||||
Exon_number | 5/6 | ||||||
Codon_change | Cga/Tga | ||||||
Amino_acid_change | R/* | ||||||
Y37E11AR.6b.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | Y37E11AR.6b.1:c.478C>T | ||||||
HGVSp | CE48555:p.Arg160Ter | ||||||
cDNA_position | 478 | ||||||
CDS_position | 478 | ||||||
Protein_position | 160 | ||||||
Exon_number | 3/3 | ||||||
Codon_change | Cga/Tga | ||||||
Amino_acid_change | R/* | ||||||
Interactor | WBInteraction000519472 | ||||||
Genetics | Interpolated_map_position | IV | -2.30737 | ||||
Mapping_data | In_multi_point | 52 | |||||
127 | |||||||
906 | |||||||
1561 | |||||||
2009 | |||||||
3241 | |||||||
Description (2) | |||||||
Reference | WBPaper00040629 | ||||||
WBPaper00031872 | |||||||
WBPaper00001328 | |||||||
WBPaper00000031 | |||||||
WBPaper00000214 | |||||||
Method | Substitution_allele |