WormBase Tree Display for Variation: WBVar00142975

WBVar00142975 Evidence: Paper_evidence: WBPaper00003757
  Name: Public_name: e120
    Other_name: F26C11.2.1:c.597+1G>A
    HGVSg: CHROMOSOME_II:g.9898071C>T
  Sequence_details: SMap: S_parent: Sequence: F26C11
    Flanking_sequences: cgaccaaatgcgaaatatcccagggttcag taatttgtttcgtatagtttttcgacaaatt
    Mapping_target: F26C11
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (254)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006744
    Transcript: F26C11.2.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F26C11.2.1:c.597+1G>A
        Intron_number: 6/7
    Interactor (16)
  Genetics: Interpolated_map_position: II 1.76951
    Mapping_data: In_2_point: 36
        38
        41
        48
        216
        218
        219
        250
        270
        324
        325
        326
        338
        339
        340
        341
        342
        343
        344
        345
        346
        575
        577
        583
        626
        649
        653
        735
        773
        776
        781
        789
        945
        1520
        1521
        1522
        1523
        1534
        1538
        2630
        2631
        3226
        3680
        4988
        6017
        6022
        6099
        6100
        6168
      In_multi_point (159)
      In_pos_neg_data (22)
    Marked_rearrangement: mIn1[unc-4(e120) dpy-10(e128)]
      mIn1[unc-4(e120)]
  Description: Phenotype (24)
    Phenotype_not_observed: WBPhenotype:0000641 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Healthy, active. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0001426 Paper_evidence: WBPaper00004883
        Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: arIs37 Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
      WBPhenotype:0001645 Paper_evidence: WBPaper00040284
        Curator_confirmed: WBPerson2987
        Remark: Table S2 Paper_evidence: WBPaper00040284
            Curator_confirmed: WBPerson2987
  Reference (54)
  Remark: Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00006744 Donor
    Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele