WormBase Tree Display for Variation: WBVar00142975

WBVar00142975 Evidence: Paper_evidence: WBPaper00003757
  Name: Public_name: e120
    Other_name: F26C11.2.1:c.597+1G>A
    HGVSg: CHROMOSOME_II:g.9898071C>T
  Sequence_details: SMap: S_parent: Sequence: F26C11
    Flanking_sequences: cgaccaaatgcgaaatatcccagggttcag taatttgtttcgtatagtttttcgacaaatt
    Mapping_target: F26C11
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (254)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006744
    Transcript: F26C11.2.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F26C11.2.1:c.597+1G>A
        Intron_number: 6/7
    Interactor (16)
  Genetics: Interpolated_map_position: II 1.76951
    Mapping_data: In_2_point (49)
      In_multi_point: 41
        45
        47
        48
        50
        51
        53
        55
        56
        206
        207
        252
        253
        274
        307
        413
        467
        468
        470
        475
        485
        519
        521
        528
        529
        537
        548
        549
        564
        565
        571
        591
        597
        631
        632
        698
        699
        701
        702
        703
        705
        706
        707
        708
        709
        710
        711
        718
        721
        725
        733
        736
        743
        745
        816
        817
        818
        819
        820
        821
        822
        823
        824
        825
        826
        827
        828
        829
        830
        831
        832
        833
        834
        835
        836
        837
        838
        839
        840
        843
        845
        847
        848
        850
        961
        1052
        1053
        1054
        1055
        1056
        1057
        1059
        1060
        1061
        1063
        1067
        1068
        1070
        1071
        1072
        1242
        1243
        1295
        1385
        1388
        1389
        1391
        1392
        1468
        1472
        1477
        1552
        1555
        1556
        1557
        1558
        1572
        1676
        1719
        1789
        2002
        2017
        2030
        2031
        2036
        2069
        2070
        2071
        2325
        2326
        2334
        2336
        2422
        2653
        2654
        2655
        2657
        2658
        2659
        2771
        2793
        2795
        2796
        2820
        2821
        2822
        3048
        3050
        3051
        3052
        3136
        3147
        3148
        3149
        3163
        3164
        3165
        3518
        3519
      In_pos_neg_data (22)
    Marked_rearrangement: mIn1[unc-4(e120) dpy-10(e128)]
      mIn1[unc-4(e120)]
  Description: Phenotype (24)
    Phenotype_not_observed: WBPhenotype:0000641 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Healthy, active. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0001426 Paper_evidence: WBPaper00004883
        Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: arIs37 Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
      WBPhenotype:0001645 Paper_evidence: WBPaper00040284
        Curator_confirmed: WBPerson2987
        Remark: Table S2 Paper_evidence: WBPaper00040284
            Curator_confirmed: WBPerson2987
  Reference (54)
  Remark: Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00006744 Donor
    Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele