WormBase Tree Display for Variation: WBVar00143004

WBVar00143004 Evidence: Person_evidence: WBPerson261
      WBPerson2629
  Name: Public_name: e164
    Other_name: CE11066:p.Gln189Ter
      F54D8.1.1:c.565C>T
    HGVSg: CHROMOSOME_III:g.5107949C>T
  Sequence_details: SMap: S_parent: Sequence: F54D8
    Flanking_sequences: gacggagaagatgctgatgatgccaaggct agactcaacaatacgatggatgcttcactt
    Mapping_target: F54D8
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (201)
    Laboratory: CB
      UP
    Status: Live
  Affects: Gene: WBGene00001076
    Transcript: F54D8.1.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F54D8.1.1:c.565C>T
        HGVSp: CE11066:p.Gln189Ter
        cDNA_position: 568
        CDS_position: 565
        Protein_position: 189
        Exon_number: 3/4
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
    Interactor: WBInteraction000502314
      WBInteraction000537325
  Genetics: Interpolated_map_position: III -2.13511
    Mapping_data: In_2_point (29)
      In_multi_point: 68
        315
        324
        325
        376
        377
        378
        429
        488
        491
        492
        498
        502
        506
        513
        580
        585
        589
        600
        611
        613
        629
        630
        729
        746
        754
        862
        863
        865
        868
        871
        877
        895
        1078
        1089
        1251
        1363
        1405
        1407
        1412
        1413
        1415
        1419
        1421
        1489
        1491
        1492
        1496
        1497
        1499
        1500
        1503
        1504
        1623
        1624
        1634
        1637
        1669
        1726
        1736
        1754
        1755
        1817
        1850
        1851
        1853
        2007
        2012
        2013
        2018
        2055
        2075
        2077
        2078
        2079
        2081
        2082
        2083
        2084
        2085
        2099
        2100
        2102
        2104
        2108
        2151
        2178
        2179
        2223
        2224
        2225
        2242
        2243
        2245
        2247
        2304
        2305
        2307
        2308
        2312
        2425
        2692
        2706
        2740
        2741
        2742
        2744
        2755
        2760
        2761
        2791
        2799
        2800
        3015
        3110
        3138
        3166
        3191
        3206
        3217
        3218
        3219
        3223
        3224
        3225
        3235
        3297
        3298
        3299
        3300
        3301
        3302
        3304
        3324
        3325
        3326
        3327
        3328
        3329
        3330
        3331
        3332
        3333
        3334
        3335
        3336
        3337
        3338
        3339
        3340
      In_pos_neg_data: 1578
        1582
        1586
        1596
        1616
        3244
  Description (2)
  Reference (20)
  Remark: Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele