WormBase Tree Display for Variation: WBVar00143148
expand all nodes | collapse all nodes | view schema
WBVar00143148 | Evidence | Person_evidence | WBPerson23830 | ||
---|---|---|---|---|---|
Name | Public_name | e362 | |||
Other_name | CE31847:p.Gln6622Ter | ||||
B0350.2f.1:c.19864C>T | |||||
HGVSg | CHROMOSOME_IV:g.6002537C>T | ||||
Sequence_details (5) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004153 | ||||
WBStrain00006357 | |||||
WBStrain00007116 | |||||
WBStrain00027196 | |||||
WBStrain00033499 | |||||
WBStrain00033522 | |||||
Laboratory | CB | ||||
Person | WBPerson23830 | ||||
Status | Live | ||||
Affects | Gene | WBGene00006780 | |||
Transcript | B0350.2f.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | B0350.2f.1:c.19864C>T | ||||
HGVSp | CE31847:p.Gln6622Ter | ||||
cDNA_position | 19864 | ||||
CDS_position | 19864 | ||||
Protein_position | 6622 | ||||
Exon_number | 16/20 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Interactor | WBInteraction000556072 | ||||
Genetics | Interpolated_map_position | IV | 2.88918 | ||
Mapping_data | In_2_point | 110 | |||
825 | |||||
In_multi_point (29) | |||||
Description (2) | |||||
Reference | WBPaper00040857 | ||||
WBPaper00028448 | |||||
WBPaper00032446 | |||||
WBPaper00000031 | |||||
WBPaper00006052 | |||||
WBPaper00022718 | |||||
WBPaper00003760 | |||||
WBPaper00016121 | |||||
WBPaper00045955 | |||||
WBPaper00049389 | |||||
Remark | alt_det = c to t mut_det = Q(6621)Ochre | ||||
Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00006780 Ochre_UAA | |||||
Method | Substitution_allele |