WormBase Tree Display for Variation: WBVar00143182
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WBVar00143182 | Evidence | Person_evidence | WBPerson3652 | ||
---|---|---|---|---|---|
Name | Public_name | e403 | |||
Other_name | CE13451:p.Trp176Ter | ||||
T08G11.5.1:c.528G>A | |||||
HGVSg | CHROMOSOME_I:g.8899384C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T08G11 | |
Flanking_sequences | acaagtgtgcactttggtatttggaagttg | actgtgagttttaagaataaatcattttta | |||
Mapping_target | T08G11 | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00006765 | |||
Transcript | T08G11.5.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | T08G11.5.1:c.528G>A | ||||
HGVSp | CE13451:p.Trp176Ter | ||||
cDNA_position | 535 | ||||
CDS_position | 528 | ||||
Protein_position | 176 | ||||
Exon_number | 8/14 | ||||
Codon_change | tgG/tgA | ||||
Amino_acid_change | W/* | ||||
Genetics | Interpolated_map_position | I | 3.2809 | ||
Mapping_data | In_2_point | 18 | |||
703 | |||||
1017 | |||||
2505 | |||||
6058 | |||||
6059 | |||||
6069 | |||||
6070 | |||||
6071 | |||||
6083 | |||||
In_multi_point | 34 | ||||
327 | |||||
400 | |||||
436 | |||||
696 | |||||
971 | |||||
988 | |||||
1234 | |||||
2460 | |||||
In_pos_neg_data (8) | |||||
Marked_rearrangement | hT1[unc-29(e403)] | ||||
szT1[lon-2(e678) unc-29(e403)] | |||||
Description | Phenotype | WBPhenotype:0000643 | Paper_evidence | WBPaper00000031 | |
Curator_confirmed | WBPerson48 | ||||
Reference | WBPaper00029020 | ||||
WBPaper00000031 | |||||
Method | Substitution_allele |