WormBase Tree Display for Variation: WBVar00143269
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WBVar00143269 | Evidence | Paper_evidence (2) | ||||
---|---|---|---|---|---|---|
Name | Public_name | e518 | ||||
Other_name | F45G2.5.1:c.167C>T | |||||
CE16048:p.Ser56Leu | ||||||
HGVSg | CHROMOSOME_III:g.13429087G>A | |||||
Sequence_details | SMap | S_parent | Sequence | F45G2 | ||
Flanking_sequences | ctgagaatacaattcgaaagaaaagtgcat | aagagaatgggtttgtttggcaactaatga | ||||
Mapping_target | F45G2 | |||||
Type_of_mutation | Substitution | c | t | Paper_evidence (2) | ||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004175 | |||||
WBStrain00029049 | ||||||
WBStrain00034353 | ||||||
Laboratory | CB | |||||
Status | Live | |||||
Affects | Gene | WBGene00000255 | ||||
Transcript | F45G2.5.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
HGVSc | F45G2.5.1:c.167C>T | |||||
HGVSp | CE16048:p.Ser56Leu | |||||
cDNA_position | 222 | |||||
CDS_position | 167 | |||||
Protein_position | 56 | |||||
Exon_number | 3/6 | |||||
Codon_change | tCa/tTa | |||||
Amino_acid_change | S/L | |||||
Interactor | WBInteraction000537317 | |||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00026992 | ||
Genetics | Interpolated_map_position | III | 21.2139 | |||
Mapping_data | In_2_point | 82 | ||||
483 | ||||||
In_multi_point | 65 | |||||
375 | ||||||
1658 | ||||||
1661 | ||||||
3055 | ||||||
3113 | ||||||
3114 | ||||||
3264 | ||||||
3265 | ||||||
3266 | ||||||
In_pos_neg_data | 355 | |||||
3245 | ||||||
8141 | ||||||
Description (2) | ||||||
Reference | WBPaper00001328 | |||||
WBPaper00000031 | ||||||
WBPaper00004883 | ||||||
WBPaper00005747 | ||||||
Method | Substitution_allele |