WormBase Tree Display for Variation: WBVar00143343
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| WBVar00143343 | Name | Public_name | e620 | ||||
|---|---|---|---|---|---|---|---|
| Other_name | C16B8.1.1:c.313C>T | ||||||
| CE44782:p.Gln105Ter | |||||||
| HGVSg | CHROMOSOME_X:g.3959108C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | C16B8 | |||
| Flanking_sequences | ccattgaaaggaacggtgccagaatctttg | agggtattcatttcgcgaaacatttttcaa | |||||
| Mapping_target | C16B8 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00024383 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004187 | ||||||
| WBStrain00008502 | |||||||
| WBStrain00008506 | |||||||
| WBStrain00026854 | |||||||
| WBStrain00026896 | |||||||
| WBStrain00027230 | |||||||
| WBStrain00030926 | |||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003007 | |||||
| Transcript | C16B8.1.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C16B8.1.1:c.313C>T | ||||||
| HGVSp | CE44782:p.Gln105Ter | ||||||
| cDNA_position | 321 | ||||||
| CDS_position | 313 | ||||||
| Protein_position | 105 | ||||||
| Exon_number | 4/14 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor (43) | |||||||
| Genetics | Interpolated_map_position | X | -8.86883 | ||||
| Mapping_data | In_multi_point (15) | ||||||
| In_pos_neg_data | 5833 | ||||||
| Description (2) | |||||||
| Reference (15) | |||||||
| Method | Substitution_allele |
