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WormBase Tree Display for Variation: WBVar00143591

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Name Class

WBVar00143591EvidencePaper_evidenceWBPaper00002751
NamePublic_namee911
Other_nameCE39210:p.Met198ThrfsTer7
CE45243:p.Met198ThrfsTer7
C01G10.11f.1:c.593_603del
CE45264:p.Met107ThrfsTer7
C01G10.11c.1:c.320_330del
C01G10.11b.1:c.593_603del
CE45251:p.Met58ThrfsTer7
C01G10.11a.1:c.593_603del
C01G10.11d.1:c.173_183del
CE39211:p.Met198ThrfsTer7
HGVSgCHROMOSOME_V:g.15076958_15076968del
Sequence_detailsSMapS_parentSequenceC01G10
Flanking_sequencescgtttttagtcatgcgatttcactggctcaacgaacgatggaatcagttgattcaatgtatt
Mapping_targetC01G10
Type_of_mutationDeletiontgatgacggatPaper_evidenceWBPaper00002751
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
Strain (54)
LaboratoryCB
DR
ZHY
MTS
StatusLive
Affects (3)
GeneticsInterpolated_map_positionV7.32233
Mapping_dataIn_2_point (13)
In_multi_point (64)
In_pos_neg_data4288
4289
4290
4304
DescriptionPhenotype (30)
Phenotype_not_observedWBPhenotype:0001426Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
Phenotype_assayGenotypearIs37Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
WBPhenotype:0001645Paper_evidenceWBPaper00040284
Curator_confirmedWBPerson2987
RemarkTable S2Paper_evidenceWBPaper00040284
Curator_confirmedWBPerson2987
WBPhenotype:0001652Paper_evidenceWBPaper00032446
Curator_confirmedWBPerson2021
WBPhenotype:0001660Paper_evidenceWBPaper00006052
Curator_confirmedWBPerson2021
RemarkNo disruption of ASE asymmetry (as seen with lim-6 and gcy-7 reporters)Paper_evidenceWBPaper00006052
Curator_confirmedWBPerson2021
Phenotype_assayGenotypeotIs114, otIs6, otIs3Paper_evidenceWBPaper00006052
Curator_confirmedWBPerson2021
Reference (19)
RemarkVariation stub/paper connection generated from the May 2021 NN VFP dataset.
Created by WBPerson51134 from the NN_VFP_triage_pipeline
MethodDeletion_allele