WormBase Tree Display for Variation: WBVar00143806
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WBVar00143806 | Evidence | Paper_evidence | WBPaper00005177 | ||
---|---|---|---|---|---|
Name | Public_name | e1180 | |||
Other_name | CE20819:p.Pro20ThrfsTer12 | ||||
F46E10.9.2:c.54dup | |||||
F46E10.9.1:c.54dup | |||||
HGVSg | CHROMOSOME_V:g.6513291dup | ||||
Sequence_details | SMap | S_parent | Sequence | F46E10 | |
Flanking_sequences | ctcggacttttcgccgttggagtctcgggg | ggacctaccagatcttccaagctcgtcttt | |||
Mapping_target | F46E10 | ||||
Type_of_mutation | Insertion | g | |||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004263 | ||||
WBStrain00007270 | |||||
WBStrain00007454 | |||||
WBStrain00007455 | |||||
WBStrain00007456 | |||||
WBStrain00007457 | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00001073 | |||
Transcript | F46E10.9.2 | VEP_consequence | frameshift_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F46E10.9.2:c.54dup | ||||
HGVSp | CE20819:p.Pro20ThrfsTer12 | ||||
cDNA_position | 208-209 | ||||
CDS_position | 54-55 | ||||
Protein_position | 18-19 | ||||
Exon_number | 3/9 | ||||
Codon_change | -/G | ||||
Amino_acid_change | -/X | ||||
F46E10.9.1 | VEP_consequence | frameshift_variant | |||
VEP_impact | HIGH | ||||
HGVSc | F46E10.9.1:c.54dup | ||||
HGVSp | CE20819:p.Pro20ThrfsTer12 | ||||
cDNA_position | 55-56 | ||||
CDS_position | 54-55 | ||||
Protein_position | 18-19 | ||||
Exon_number | 2/8 | ||||
Codon_change | -/G | ||||
Amino_acid_change | -/X | ||||
Interactor | WBInteraction000537327 | ||||
Genetics | Interpolated_map_position | V | -0.00140555 | ||
Description | Phenotype (6) | ||||
Reference | WBPaper00005747 | ||||
WBPaper00005177 | |||||
WBPaper00015216 | |||||
Method | Insertion_allele |