WormBase Tree Display for Variation: WBVar00144920
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| WBVar00144920 | Evidence | Paper_evidence | WBPaper00026735 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e2689 | |||||
| Other_name | M02B1.1a.1:c.388C>T | ||||||
| M02B1.1c.1:c.16C>T | |||||||
| M02B1.1b.1:c.268C>T | |||||||
| CE43555:p.Gln130Ter | |||||||
| CE45668:p.Gln6Ter | |||||||
| CE37656:p.Gln90Ter | |||||||
| HGVSg | CHROMOSOME_IV:g.12851646C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | M02B1 | |||
| Flanking_sequences | gtttgcattcccgccatgatctacatagtt | aaaataatcttttctacgtggcagcttcac | |||||
| Mapping_target | M02B1 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00013440 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004702 | ||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00005153 | |||||
| Transcript | M02B1.1b.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | M02B1.1b.1:c.268C>T | ||||||
| HGVSp | CE37656:p.Gln90Ter | ||||||
| cDNA_position | 268 | ||||||
| CDS_position | 268 | ||||||
| Protein_position | 90 | ||||||
| Exon_number | 3/6 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| M02B1.1a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | M02B1.1a.1:c.388C>T | ||||||
| HGVSp | CE43555:p.Gln130Ter | ||||||
| cDNA_position | 400 | ||||||
| CDS_position | 388 | ||||||
| Protein_position | 130 | ||||||
| Exon_number | 5/9 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| M02B1.1c.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | M02B1.1c.1:c.16C>T | ||||||
| HGVSp | CE45668:p.Gln6Ter | ||||||
| cDNA_position | 16 | ||||||
| CDS_position | 16 | ||||||
| Protein_position | 6 | ||||||
| Exon_number | 1/4 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000008514 | ||||||
| Genetics | Interpolated_map_position | IV | 6.37322 | ||||
| Description (2) | |||||||
| Reference | WBPaper00024246 | ||||||
| WBPaper00026735 | |||||||
| Method | Substitution_allele |
