WormBase Tree Display for Variation: WBVar00144939
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| WBVar00144939 | Evidence | Paper_evidence | WBPaper00026735 | |||||
|---|---|---|---|---|---|---|---|---|
| Name | Public_name | e2709 | ||||||
| Sequence_details | SeqStatus | Pending_curation | ||||||
| Variation_type | Allele | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00004669 | |||||||
| Laboratory | CB | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00044628 | ||||||
| Isolation | Mutagen | EMS | ||||||
| Description | Phenotype | WBPhenotype:0001014 | Person_evidence | WBPerson261 | ||||
| Curator_confirmed | WBPerson48 | |||||||
| Remark | Resistant to infection by M. nematophilum. | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson48 | |||||||
| Penetrance | Complete | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson48 | |||||||
| Recessive | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson48 | |||||||
| Variation_effect | Loss_of_function_undetermined_extent | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson48 | |||||||
| WBPhenotype:0001411 | Paper_evidence | WBPaper00026735 | ||||||
| Person_evidence | WBPerson261 | |||||||
| Curator_confirmed | WBPerson48 | |||||||
| Remark | Lectin staining abnormal. | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson48 | |||||||
| Based on lectin binding properties to the cuticle | Paper_evidence | WBPaper00026735 | ||||||
| Curator_confirmed | WBPerson48 | |||||||
| Phenotype_assay | Treatment | Tested the following fluorescein or rhodamine-conjugated lectins: WGA, SBA, TPA, PEA,, CON, LEA. | Paper_evidence | WBPaper00026735 | ||||
| Curator_confirmed | WBPerson48 | |||||||
| WBPhenotype:0001413 | Paper_evidence | WBPaper00026735 | ||||||
| Curator_confirmed | WBPerson48 | |||||||
| Remark | Slight tail swelling when grown on pure M. nematophilum. | Paper_evidence | WBPaper00026735 | |||||
| Curator_confirmed | WBPerson48 | |||||||
| Penetrance | Incomplete | variable | Paper_evidence | WBPaper00026735 | ||||
| Curator_confirmed | WBPerson48 | |||||||
| WBPhenotype:0001416 | Paper_evidence | WBPaper00026735 | ||||||
| Curator_confirmed | WBPerson48 | |||||||
| Remark | Based on vital dye staining for bacteria to reveal M. nematophilum; reduced rectal staining, indicating reduced adherence in the usual region. | Paper_evidence | WBPaper00026735 | |||||
| Curator_confirmed | WBPerson48 | |||||||
| Phenotype_not_observed (2) | ||||||||
| Reference | WBPaper00026735 | |||||||
| WBPaper00031925 | ||||||||
| WBPaper00029153 | ||||||||
| Method | Allele |
