WormBase Tree Display for Variation: WBVar00145293
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WBVar00145293 | Evidence | Paper_evidence | WBPaper00005923 | |||
---|---|---|---|---|---|---|
Name | Public_name | ez1 | ||||
Other_name | F54C1.3b.1:c.2T>A | |||||
F54C1.3a.1:c.2T>A | ||||||
CE53747:p.Met1? | ||||||
CE11046:p.Met1? | ||||||
F54C1.3a.2:c.2T>A | ||||||
HGVSg | CHROMOSOME_I:g.4996845T>A | |||||
Sequence_details | SMap | S_parent | Sequence | F54C1 | ||
Flanking_sequences | ttttaaaacacaaaaaatcattgcagggta | gactccggcgacggcagaggtgaaagttgg | ||||
Mapping_target | F54C1 | |||||
Type_of_mutation | Substitution | t | a | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Laboratory | DZ | |||||
Status | Live | |||||
Affects | Gene | WBGene00003221 | ||||
Transcript | F54C1.3a.1 (11) | |||||
F54C1.3b.1 | VEP_consequence | start_lost | ||||
VEP_impact | HIGH | |||||
PolyPhen | 0.026 | benign | ||||
HGVSc | F54C1.3b.1:c.2T>A | |||||
HGVSp | CE53747:p.Met1? | |||||
cDNA_position | 11 | |||||
CDS_position | 2 | |||||
Protein_position | 1 | |||||
Exon_number | 2/16 | |||||
Codon_change | aTg/aAg | |||||
Amino_acid_change | M/K | |||||
F54C1.3a.2 (11) | ||||||
Genetics | Interpolated_map_position | I | -0.428963 | |||
Reference | WBPaper00018400 | |||||
Method | Substitution_allele |