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WormBase Tree Display for Variation: WBVar00145412

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Name Class

WBVar00145412EvidencePaper_evidenceWBPaper00024331
NamePublic_namega80
Other_nameCE08973:p.Gln97Ter
C54D1.6.1:c.289C>T
HGVSgCHROMOSOME_X:g.7170149G>A
Sequence_detailsSMapS_parentSequenceC54D1
Flanking_sequencesgactatgagccgatccccactctttcagataagtaagaccatttcatatcaaaatgcgct
Mapping_targetC54D1
Type_of_mutationSubstitutionctPaper_evidenceWBPaper00024331
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00007434
WBStrain00023612
WBStrain00034113
WBStrain00034115
WBStrain00034116
LaboratorySD
StatusLive
AffectsGeneWBGene00000238
TranscriptC54D1.6.1VEP_consequencestop_gained,splice_region_variant
VEP_impactHIGH
HGVScC54D1.6.1:c.289C>T
HGVSpCE08973:p.Gln97Ter
cDNA_position298
CDS_position289
Protein_position97
Exon_number4/19
Codon_changeCaa/Taa
Amino_acid_changeQ/*
Interactor (211)
IsolationMutagenEMS
GeneticsInterpolated_map_positionX-1.80941
DescriptionPhenotype (32)
Phenotype_not_observed (15)
ReferenceWBPaper00026603
WBPaper00039829
WBPaper00003991
WBPaper00004579
WBPaper00005278
WBPaper00005277
WBPaper00027345
WBPaper00010775
WBPaper00031110
WBPaper00024331
WBPaper00003200
WBPaper00031002
WBPaper00025199
WBPaper00024898
WBPaper00003818
WBPaper00004436
WBPaper00003428
WBPaper00004408
WBPaper00004312
WBPaper00027035
WBPaper00005344
WBPaper00010239
WBPaper00025616
WBPaper00026334
WBPaper00031872
WBPaper00032446
WBPaper00035891
WBPaper00004616
WBPaper00005116
WBPaper00057074
MethodSubstitution_allele