WormBase Tree Display for Variation: WBVar00145771
expand all nodes | collapse all nodes | view schema
WBVar00145771 | Name | Public_name | gk365 | ||
---|---|---|---|---|---|
Other_name | C34H3.1.1:c.-49_189+192del | ||||
HGVSg | CHROMOSOME_X:g.6150058_6150534del | ||||
Sequence_details | SMap | S_parent | Sequence | C34H3 | |
Flanking_sequences | attgaatttaaatttttaatacttgaacat | gctaaaaatctgaaaacaagtttattaatg | |||
Mapping_target | C34H3 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | gk365_external | ||||
gk365_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036173 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00016423 | |||
Transcript | C34H3.1.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | C34H3.1.1:c.-49_189+192del | ||||
cDNA_position | 16-? | ||||
Intron_number | 2-3/14 | ||||
Exon_number | 1-3/15 | ||||
Isolation | Mutagen | TMP/UV | |||
Genetics | Mapping_data | In_multi_point | 5241 | ||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |