WormBase Tree Display for Variation: WBVar00146091

WBVar00146091 Name: Public_name: gk780
    HGVSg: CHROMOSOME_X:g.4554383_4555676del
  Sequence_details: SMap: S_parent: Sequence: C07A12
    Flanking_sequences: aatgcattgtccaatcgctgctatgtatgc agagccaaaatgaccaacattattgacagt
    Mapping_target: C07A12
    Type_of_mutation: Deletion
    PCR_product: GK780_external
      GK780_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036785
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00196162
      WBGene00201370
      WBGene00197381
      WBGene00001821
    Transcript: C07A12.14 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: 95-?
        Exon_number: 1/1
      C05E11.11 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      C07A12.1b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/7
        Exon_number: 1-2/8
      C07A12.10 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-200
        Exon_number: 1/1
      C07A12.1a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/7
        Exon_number: 1-2/8
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele