WormBase Tree Display for Variation: WBVar00146337
expand all nodes | collapse all nodes | view schema
WBVar00146337 | Evidence | Paper_evidence | WBPaper00003653 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | gm105 | ||||||
Other_name | C01G6.8c.2:c.1216C>T | |||||||
CE39126:p.Gln406Ter | ||||||||
C01G6.8c.1:c.1216C>T | ||||||||
CE32563:p.Gln565Ter | ||||||||
C01G6.8a.1:c.1693C>T | ||||||||
CE24774:p.Gln539Ter | ||||||||
C01G6.8b.1:c.1615C>T | ||||||||
HGVSg | CHROMOSOME_II:g.9297602G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C01G6 | ||||
Flanking_sequences | ccaccatatccaatggatcaacatctccaa | aagctcgtcgttttccatctcaagagccaa | ||||||
Mapping_target | C01G6 | |||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00003653 | |||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00040346 | |||||||
Laboratory | NG | |||||||
Status | Live | |||||||
Affects (2) | ||||||||
Genetics | Interpolated_map_position | II | 1.10207 | |||||
Description | Phenotype | WBPhenotype:0000006 | Paper_evidence | WBPaper00002978 | ||||
Curator_confirmed | WBPerson557 | |||||||
Penetrance | Incomplete | 70 percent | Paper_evidence | WBPaper00002978 | ||||
Curator_confirmed | WBPerson557 | |||||||
WBPhenotype:0000230 | Paper_evidence | WBPaper00002978 | ||||||
Curator_confirmed | WBPerson557 | |||||||
Penetrance | Low | 9 percent | Paper_evidence | WBPaper00002978 | ||||
Curator_confirmed | WBPerson557 | |||||||
WBPhenotype:0000308 | Paper_evidence | WBPaper00003653 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Dauer development is disrupted. | Paper_evidence | WBPaper00003653 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000406 | Paper_evidence | WBPaper00002978 | ||||||
Curator_confirmed | WBPerson557 | |||||||
Penetrance | Low | 6 percent | Paper_evidence | WBPaper00002978 | ||||
Curator_confirmed | WBPerson557 | |||||||
WBPhenotype:0000594 | Paper_evidence | WBPaper00003653 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | This mutation only has subtle effects on cell migrations. | Paper_evidence | WBPaper00003653 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000643 | Paper_evidence | WBPaper00003653 | ||||||
WBPaper00002978 | ||||||||
Curator_confirmed | WBPerson712 | |||||||
WBPerson557 | ||||||||
Remark | Locomotion is disrupted. | Paper_evidence | WBPaper00003653 | |||||
Curator_confirmed | WBPerson712 | |||||||
Penetrance | Incomplete | 87 percent | Paper_evidence | WBPaper00002978 | ||||
Curator_confirmed | WBPerson557 | |||||||
WBPhenotype:0001224 | Paper_evidence | WBPaper00003653 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | CP axon outgrowth is disrupted. | Paper_evidence | WBPaper00003653 | |||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_not_observed | WBPhenotype:0000163 | Paper_evidence | WBPaper00002978 | |||||
Curator_confirmed | WBPerson557 | |||||||
WBPhenotype:0000218 | Paper_evidence | WBPaper00031110 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | No significant number of overinduced animals (worms with greater than three VPCs induced) were detected. | Paper_evidence | WBPaper00031110 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000219 | Paper_evidence | WBPaper00031110 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | No underinduced animals (worms with fewer than 22 vulval cells or fewer than three VPCs induced) were detected. | Paper_evidence | WBPaper00031110 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000700 | Paper_evidence | WBPaper00002978 | ||||||
Curator_confirmed | WBPerson557 | |||||||
WBPhenotype:0001585 | Paper_evidence | WBPaper00003653 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | V1 division is not affected as in gm122 mutants. | Paper_evidence | WBPaper00003653 | |||||
Curator_confirmed | WBPerson712 | |||||||
Reference | WBPaper00031110 | |||||||
WBPaper00003653 | ||||||||
WBPaper00002978 | ||||||||
WBPaper00018944 | ||||||||
Method | Substitution_allele |