WormBase Tree Display for Variation: WBVar00146344
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| WBVar00146344 | Evidence | Paper_evidence | WBPaper00003653 | ||
|---|---|---|---|---|---|
| WBPaper00042557 | |||||
| Name | Public_name | gm122 | |||
| Other_name | C01G6.8b.1:c.757C>T | ||||
| C01G6.8a.1:c.835C>T | |||||
| CE39126:p.Gln120Ter | |||||
| C01G6.8c.1:c.358C>T | |||||
| C01G6.8c.2:c.358C>T | |||||
| CE24774:p.Gln253Ter | |||||
| CE32563:p.Gln279Ter | |||||
| HGVSg | CHROMOSOME_II:g.9298616G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C01G6 | |
| Flanking_sequences | tataaagtttgcgaatcggattctaacaat | aaattgtttcgatttgcaagcacgattgtg | |||
| Mapping_target | C01G6 | ||||
| Type_of_mutation | Substitution | c | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00028753 | ||||
| WBStrain00035434 | |||||
| WBStrain00035438 | |||||
| WBStrain00035439 | |||||
| WBStrain00055653 | |||||
| Laboratory | NG | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00000289 | |||
| Transcript | C01G6.8c.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | C01G6.8c.1:c.358C>T | ||||
| HGVSp | CE39126:p.Gln120Ter | ||||
| cDNA_position | 461 | ||||
| CDS_position | 358 | ||||
| Protein_position | 120 | ||||
| Exon_number | 3/8 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| C01G6.8b.1 | VEP_consequence | stop_gained | |||
| VEP_impact | HIGH | ||||
| HGVSc | C01G6.8b.1:c.757C>T | ||||
| HGVSp | CE24774:p.Gln253Ter | ||||
| cDNA_position | 789 | ||||
| CDS_position | 757 | ||||
| Protein_position | 253 | ||||
| Exon_number | 5/10 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| C01G6.8c.2 | VEP_consequence | stop_gained | |||
| VEP_impact | HIGH | ||||
| HGVSc | C01G6.8c.2:c.358C>T | ||||
| HGVSp | CE39126:p.Gln120Ter | ||||
| cDNA_position | 363 | ||||
| CDS_position | 358 | ||||
| Protein_position | 120 | ||||
| Exon_number | 2/7 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| C01G6.8a.1 | VEP_consequence | stop_gained | |||
| VEP_impact | HIGH | ||||
| HGVSc | C01G6.8a.1:c.835C>T | ||||
| HGVSp | CE32563:p.Gln279Ter | ||||
| cDNA_position | 838 | ||||
| CDS_position | 835 | ||||
| Protein_position | 279 | ||||
| Exon_number | 6/11 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| Interactor (53) | |||||
| Genetics | Interpolated_map_position | II | 1.10234 | ||
| Description (2) | |||||
| Reference (11) | |||||
| Method | Substitution_allele |
