WormBase Tree Display for Variation: WBVar00147276
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WBVar00147276 | Name | Public_name | WBVar00147276 | ||
---|---|---|---|---|---|
Other_name | haw526 | ||||
haw112469 | |||||
cewivar00160602 | |||||
R119.2b.1:c.213-17A>T | |||||
R119.2a.1:c.207-17A>T | |||||
HGVSg | CHROMOSOME_I:g.371690T>A | ||||
Sequence_details | SMap | S_parent | Sequence | R119 | |
Flanking_sequences | tttaggtatctgcaaaaaaaaaaaa | ttttcaaatttttttctgttaaaaa | |||
Mapping_target | R119 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01281328 | |||
WBVar00532334 | |||||
Status | Live | ||||
Affects | Gene | WBGene00020088 | |||
Transcript | R119.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R119.2b.1:c.213-17A>T | ||||
Intron_number | 2/5 | ||||
R119.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R119.2a.1:c.207-17A>T | ||||
Intron_number | 3/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw526 | ||||
Method | WGS_Hawaiian_Waterston |