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WormBase Tree Display for Variation: WBVar00147284

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Name Class

WBVar00147284NamePublic_nameWBVar00147284
Other_namehaw534
haw112476
cewivar00066314
CE54597:p.Leu2=
R119.2b.1:c.6C>A
CE46866:p.Leu2=
R119.2a.1:c.6C>A
HGVSgCHROMOSOME_I:g.373440G>T
Sequence_detailsSMapS_parentSequenceR119
Flanking_sequencesacattggtaggctccgcccacttctagcattttttttttggatctgatct
Mapping_targetR119
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (132)
LaboratoryRW
QX
AX
PersonWBPerson1562
WBPerson4037
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01429770
WBVar00532341
WBVar01281417
StatusLive
AffectsGeneWBGene00020088
TranscriptR119.2b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScR119.2b.1:c.6C>A
HGVSpCE54597:p.Leu2=
cDNA_position6
CDS_position6
Protein_position2
Exon_number1/6
Codon_changectC/ctA
Amino_acid_changeL
R119.2a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScR119.2a.1:c.6C>A
HGVSpCE46866:p.Leu2=
cDNA_position26
CDS_position6
Protein_position2
Exon_number2/7
Codon_changectC/ctA
Amino_acid_changeL
ReferenceWBPaper00038208
WBPaper00040707
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw534
MethodWGS_Hawaiian_Waterston