WormBase Tree Display for Variation: WBVar00147284
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WBVar00147284 | Name | Public_name | WBVar00147284 | ||
---|---|---|---|---|---|
Other_name | haw534 | ||||
haw112476 | |||||
cewivar00066314 | |||||
CE54597:p.Leu2= | |||||
R119.2b.1:c.6C>A | |||||
CE46866:p.Leu2= | |||||
R119.2a.1:c.6C>A | |||||
HGVSg | CHROMOSOME_I:g.373440G>T | ||||
Sequence_details | SMap | S_parent | Sequence | R119 | |
Flanking_sequences | acattggtaggctccgcccacttct | agcattttttttttggatctgatct | |||
Mapping_target | R119 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (132) | |||||
Laboratory | RW | ||||
QX | |||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01429770 | |||
WBVar00532341 | |||||
WBVar01281417 | |||||
Status | Live | ||||
Affects | Gene | WBGene00020088 | |||
Transcript | R119.2b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | R119.2b.1:c.6C>A | ||||
HGVSp | CE54597:p.Leu2= | ||||
cDNA_position | 6 | ||||
CDS_position | 6 | ||||
Protein_position | 2 | ||||
Exon_number | 1/6 | ||||
Codon_change | ctC/ctA | ||||
Amino_acid_change | L | ||||
R119.2a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | R119.2a.1:c.6C>A | ||||
HGVSp | CE46866:p.Leu2= | ||||
cDNA_position | 26 | ||||
CDS_position | 6 | ||||
Protein_position | 2 | ||||
Exon_number | 2/7 | ||||
Codon_change | ctC/ctA | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw534 | ||||
Method | WGS_Hawaiian_Waterston |